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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KRT85, keratin 85
Sequence ID:NM_002283
RefSeqGene ID:NG_008353
Entrez Gene ID:3891
Ensembl ID:ENSG00000135443

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 52754339 - 52758406

NM_002283 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
310415275379152754829
104210735275525052755281
107412945275603452756254
129514205275663752756762
142115855275702952757193
158616815275785152757946
168217425275808952758149
174319515275874552758953
195224915276076952761308

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100066353Full LengthBC166627keratin 85

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002274  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002283 NP_002274 P78386 Filament

Related Sequences

 
mRNAGenPeptSwissProt
BC166627 AAI66627  
AK302303 BAH13669 B7Z7N3
X99140 CAA67577 P78386

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KRT85 NP_002274 R.norvegicus Krt83 681126   NP_001095145 88
M.musculus Krt83 406219 Gene Info NP_001003668 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)