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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CASC5, cancer susceptibility candidate 5
Sequence ID:NM_144508
NM_170589
Entrez Gene ID:57082
Ensembl ID:ENSG00000137812

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
MICROCEPHALY 4, PRIMARY, AUTOSOMAL RECESSIVECEP152
CEP152

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 40886446 - 40917786

 Exon Info From UCSC:
NM_144508
NM_170589

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069116Full LengthBC172422cancer susceptibility candidate 5
4611681IncompleteBC029373cancer susceptibility candidate 5

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_144508 NP_653091    
NM_170589 NP_733468 Q8NG31  

Related Sequences

 
mRNAGenPeptSwissProt
AF248041 AAF97513 Q8NG31
BC029373 AAH29373 Q05C46
BC172422 AAI72422  
AF461041 AAL67803 Q8NG31
AF173994 AAM45143 Q8NG31
AB046790 BAB13396 Q8NG31
AB022190 BAC05691 Q8NG31

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CASC5 NP_653091 R.norvegicus Casc5 311327   XP_230465 60
M.musculus Casc5 76464 Gene Info NP_083893 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)