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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. MYOD1, myogenic differentiation 1
Sequence ID:NM_002478
Entrez Gene ID:4654
Ensembl ID:ENSG00000129152

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15.4Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 17741113 - 17743055

NM_002478 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5022419Full LengthBC064493myogenic differentiation 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002469  

Protein Infomation

NM_002478 NP_002469 P15172 HLH

Related Sequences

BC064493 AAH64493 P15172
BT007157 AAP35821 P15172
AK314968 BAG37469 B2RC72
X17650 CAA35640 P15172
X56677 CAA40000 P15172

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens MYOD1 NP_002469 M.musculus Myod1 17927 Gene Info NP_034996 89
R.norvegicus Myod1 337868   NP_788268 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta