Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TNFSF4, tumor necrosis factor (ligand) superfamily, member 4
Sequence ID:NM_003326
RefSeqGene ID:NG_011477
Entrez Gene ID:7292
Ensembl ID:ENSG00000117586

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
MYOCARDIAL INFARCTIONESR1
F13A1
F7
GCLC
GCLM
ITGB3
LGALS2
LRP8
LTA
MIAT
OLR1
PSMA6
THBD

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 173154837 - 173174612

NM_003326 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
23135173152870173156003
31363184173157659173157707
31853493173176162173176470

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4510740Full LengthBC041663tumor necrosis factor (ligand) superfamily, member 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003317  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003326 NP_003317 P23510 TNF

Related Sequences

 
mRNAGenPeptSwissProt
BC041663 AAH41663 Q8IV74
D90224 BAA14259 P23510
AK297932 BAG60249 Q8IV74
X79929 CAA56284 P23510
CR542033 CAG46830 Q6FGS4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TNFSF4 NP_003317 R.norvegicus Tnfsf4 89814   NP_446004 48
M.musculus Tnfsf4 22164 Gene Info NP_033478 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta