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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PICK1, protein interacting with PRKCA 1
Sequence ID:NM_001039583
NM_001039584
NM_012407
Entrez Gene ID:9463
Ensembl ID:ENSG00000100151

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 38453448 - 38471706

 Exon Info From UCSC:
NM_001039583
NM_001039584
NM_012407

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4026028Full LengthBC017561protein interacting with PRKCA 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036539  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001039583 NP_001034672    
NM_001039584 NP_001034673    
NM_012407 NP_036539 Q9NRD5 PDZ
Arfaptin

Related Sequences

 
mRNAGenPeptSwissProt
AF231710 AAF97502 Q9NRD5
BC017561 AAH17561 Q9NRD5
DQ893110 ABM84036  
DQ896384 ABM87383  
AB026491 BAA89294 Q9NRD5
AK222640 BAD96360 Q53HE0
AK000875 BAG50834 B3KM22
AK092818 BAG52614 B3KS52
AK299684 BAG61591 B4DSC9
AL049654 CAB41082 Q9NRD5
CR456550 CAG30436 Q9NRD5
CU013150 CAK54581  
CU013438 CAK54880  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PICK1 NP_001034672 R.norvegicus Pick1 84591   NP_445912 97
M.musculus Pick1 18693 Gene Info NP_001039023 97
A.gambiae AgaP_AGAP007832 1278125   XP_317666 61
D.melanogaster PICK1 34677   NP_609582 60
C.elegans Y57G11C.22 178409   NP_001041046 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)