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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. STX3, syntaxin 3
Sequence ID:NM_001178040
NM_004177
Entrez Gene ID:6809
Ensembl ID:ENSG00000166900

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 59523078 - 59564839

 Exon Info From UCSC:
NM_001178040
NM_004177

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3010338Full LengthBC007405syntaxin 3
3010338Full LengthBC007429syntaxin 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004168  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001178040 NP_001171511    
NM_004177 NP_004168 Q13277
Q53YE2
Syntaxin
SNARE

Related Sequences

 
mRNAGenPeptSwissProt
U32315 AAA75303 Q13277
BC007405 AAH07405 Q13277
Q53YE2
BC007429 AAH07429 Q13277
Q53YE2
BT006666 AAP35312 Q53YE2
HQ447354 ADQ31840  
AK290251 BAF82940 Q53YE2
AK312909 BAG35755 Q53YE2
AK125660 BAG54232 Q53YE2
AK293494 BAG56981 B4DE70
AK297419 BAG59852 Q13277
AJ002076 CAA05175 Q13277
Q53YE2
AJ002077 CAA05176 Q13277
X90581 CAA62209 Q13277
BX538158 CAD98039 Q7Z338

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens STX3 NP_004168 M.musculus Stx3 20908 Gene Info NP_689344 98
R.norvegicus Stx3 81802   NP_112386 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)