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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FLOT1, Flotillin 1
Sequence ID:NM_005803
Entrez Gene ID:10211
Ensembl ID:ENSG00000137312

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 30695606 - 30710417

 Exon Info From UCSC:
NM_005803

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3534771Full LengthBC001146flotillin 1
40112645IncompleteBC128154flotillin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005794  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005803 NP_005794 O75955
Q5ST80
Band_7
Flotillin

Related Sequences

 
mRNAGenPeptSwissProt
AF089750 AAC35387 O75955
Q5ST80
AF085357 AAD40192 O75955
AF117234 AAF17215 O75955
BC001146 AAH01146 O75955
Q5ST80
BC128154 AAI28155 A2VCL5
BT007077 AAP35740 O75955
Q5ST80
DQ893815 ABM84741  
DQ890639 ABM92256  
AK222530 BAD96250 Q53HQ0
AK301291 BAG62849 B4DVY7
CR456946 CAG33227 Q6IB58

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FLOT1 NP_005794 M.musculus Flot1 14251 Gene Info NP_032053 98
R.norvegicus Flot1 64665   NP_073192 98
A.gambiae AgaP_AGAP007494 1269732   XP_308381 67
D.melanogaster Flo 36726   NP_477358 65

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)