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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TXLNA, taxilin alpha
Sequence ID:NM_175852
Entrez Gene ID:200081
Ensembl ID:ENSG00000084652

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p35.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 32662445 - 32663886

 Exon Info From UCSC:
NM_175852

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6598234Full LengthBC080578taxilin alpha
40001224Full LengthBC103823taxilin alpha
40001225Full LengthBC103824taxilin alpha
4993857IncompleteBC029686taxilin alpha
40001227IncompleteBC103825taxilin alpha

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_175852 NP_787048 P40222  

Related Sequences

 
mRNAGenPeptSwissProt
BC029686 AAH29686 P40222
BC046565 AAH46565 P40222
BC080578 AAH80578 P40222
BC103823 AAI03824 P40222
BC103824 AAI03825 P40222
BC103825 AAI03826 A0AUK0
AF516206 AAO42465 P40222
AL832636 CAD89951 P40222
AL832637 CAD89952 P40222
AL832338 CAD91138 P40222
AL713662 CAH10633 Q69YT3
AM393586 CAL38463  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TXLNA NP_787048 M.musculus Txlna 109658 Gene Info NP_001005506 91
A.gambiae AgaP_AGAP009667 1279054   XP_318714 39
D.melanogaster CG5886 43125   NP_651435 36
C.elegans myosin 172568   NP_492192 33
N.crassa NCU01273 3876901   XP_960751 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta