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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PIGK, Phosphatidylinositol glycan anchor biosynthesis, class K
Sequence ID:NM_005482
Entrez Gene ID:10026
Ensembl ID:ENSG00000142892

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 77557386 - 77685103

 Exon Info From UCSC:
NM_005482

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4722399Full LengthBC020737phosphatidylinositol glycan anchor biosynthesis, class K

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005473  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005482 NP_005473 Q92643 Peptidase_C13

Related Sequences

 
mRNAGenPeptSwissProt
AF022913 AAB81597 Q92643
BC020737 AAH20737 Q92643
HQ447704 ADQ32189  
AK313015 BAG35850 Q92643
AK304340 BAG65185 B4E2M3
Y07596 CAA68871 Q92643

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PIGK NP_005473 R.norvegicus Pigk 295543   NP_001011953 94
M.musculus Pigk 329777 Gene Info NP_079938 91
A.gambiae AgaP_AGAP004301 1274450   XP_313575 71
S.cerevisiae GPI8 851931   NP_010618 61
D.melanogaster CG4406 31163   NP_569968 60
N.crassa NCU07259 3878279   XP_962113 60
S.pombe gpi8 2539272   NP_588198 58
C.elegans T05E11.6 188131   NP_502076 56
A.thaliana AT1G08750 837397   NP_563825 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)