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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SF3B14, Splicing factor 3B, 14 kDa subunit
Sequence ID:NM_016047
Entrez Gene ID:51639
Ensembl ID:ENSG00000115128

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2pter-p25.1

Chromosomal Position (from UCSC)

Chromosomal Position:2: 24298659 - 24299179

NM_016047 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
142802429045424290720
2814192429119024291328
4205382429694524297063
5397832429906924299313

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3914184Full LengthBC015463splicing factor 3B, 14 kDa subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057131  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016047 NP_057131 Q9Y3B4
Q53TM1
RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
AF151868 AAD34105 Q9Y3B4
Q53TM1
AF161523 AAF29138 Q9Y3B4
Q53TM1
AF184213 AAG09698 Q9Y3B4
Q53TM1
BC015463 AAH15463 Q9Y3B4
Q53TM1
AF401310 AAK94041 Q9Y3B4
Q53TM1
JF432474 ADZ15691  
AK311908 BAG34849 Q53TM1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SF3B14 NP_057131 M.musculus 0610009D07Rik 66055 Gene Info NP_079599 100
D.melanogaster CG13298 38720   NP_648037 77
A.gambiae AgaP_AGAP002780 1273189   XP_312143 74
P.falciparum PFL1200c 811292   XP_001350646 71
C.elegans C50D2.5 173394   NP_493659 68
S.pombe SPBC29A3.07c 2540462   NP_595835 68
A.thaliana AT5G12190 831092   NP_196780 64
N.crassa NCU02837 3880276   XP_964127 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)