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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ABCB10, ATP-binding cassette, sub-family B (MDR/TAP), member 10
Sequence ID:NM_012089
Entrez Gene ID:23456
Ensembl ID:ENSG00000135776

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q42.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 229652328 - 229694432

 Exon Info From UCSC:
NM_012089

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6143235Full LengthBC064930ATP-binding cassette, sub-family B (MDR/TAP), member 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036221  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012089 NP_036221 Q9NRK6 ABC_tran
ABC_membrane

Related Sequences

 
mRNAGenPeptSwissProt
U18237 AAA84438 Q9NRK6
AF216833 AAF78198 Q9NRK6
BC064930 AAH64930 Q9NRK6
AF277184 AAK07543 Q9BXW0
AB013380 BAB20265 Q9NRK6
AK172794 BAD18770 Q6ZMF8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ABCB10 NP_036221 M.musculus Abcb10 56199 Gene Info NP_062425 80
R.norvegicus Abcb10 361439   NP_001012166 78
D.melanogaster CG3156 30994   NP_569844 51
A.gambiae AgaP_AGAP002717 1273250   XP_312209 49
N.crassa NCU04117 3877437   XP_961273 47
C.elegans haf-3 180056   NP_506927 46
A.thaliana TAP2 833896   NP_198720 45
S.cerevisiae MDL1 850885   NP_013289 44
S.pombe mdl1 2541285   NP_595751 44
C.elegans haf-1 178522   NP_503098 42
P.falciparum PFC0125w 814343   XP_001351101 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)