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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CHST11, carbohydrate (chondroitin 4) sulfotransferase 11
Sequence ID:NM_001173982
NM_018413
RefSeqGene ID:NG_029810
Entrez Gene ID:50515
Ensembl ID:ENSG00000171310

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q

Chromosomal Position (from UCSC)

Chromosomal Position:12: 104850803 - 105151689

 Exon Info From UCSC:
NM_001173982
NM_018413

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4042813Full LengthBC013315carbohydrate (chondroitin 4) sulfotransferase 11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060883  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001173982 NP_001167453      
NM_018413 NP_060883 Q9NPF2 EC 2.8.2.5 Sulfotransfer_2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF239820 AAF81691 Q9NPF2 EC 2.8.2.5
BC013315 AAH13315 Q9NPF2 EC 2.8.2.5
AY533204 AAU87522    
AY533205 AAU87523    
HQ447191 ADQ31678    
AB042326 BAA95485 Q9NPF2 EC 2.8.2.5
AK290923 BAF83612 Q9NPF2 EC 2.8.2.5
AJ269537 CAB87380 Q9NPF2 EC 2.8.2.5
AJ289134 CAB92134 Q9NPF2 EC 2.8.2.5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHST11 NP_001167453 R.norvegicus Chst11 314694   NP_001101549 97
M.musculus Chst11 58250 Gene Info NP_067414 97
A.gambiae AgaP_AGAP004371 1274517   XP_313654 41
D.melanogaster CG31743 326156   NP_609820 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)