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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLSPN, Claspin
Sequence ID:NM_022111
NM_001190481
Entrez Gene ID:63967
Ensembl ID:ENSG00000092853

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p34.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 36226153 - 36235579

 Exon Info From UCSC:
NM_022111
NM_001190481

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7961363Full LengthBC115025claspin homolog (Xenopus laevis)
7961366Full LengthBC115026claspin homolog (Xenopus laevis)
7961377Full LengthBC113116claspin homolog (Xenopus laevis)
9021276Full LengthBC137279claspin homolog (Xenopus laevis)
9021657Full LengthBC140789claspin homolog (Xenopus laevis)
4104653IncompleteBC018670claspin homolog (Xenopus laevis)
6050313IncompleteBC038991claspin homolog (Xenopus laevis)
6738598IncompleteBC062215claspin homolog (Xenopus laevis)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001190481 NP_001177410    
NM_022111 NP_071394 Q9HAW4  

Related Sequences

 
mRNAGenPeptSwissProt
AF297866 AAG24515 Q9HAW4
BC018670 AAH18670 Q05D30
BC038991 AAH38991 Q9HAW4
BC062215 AAH62215 Q9HAW4
BC113116 AAI13117 Q9HAW4
BC115025 AAI15026 Q9HAW4
BC115026 AAI15027 Q1RMC5
BC137279 AAI37280 Q9HAW4
BC140789 AAI40790 Q9HAW4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLSPN NP_071394 R.norvegicus Clspn 298534   NP_001100157 78
M.musculus Clspn 269582 Gene Info NP_780763 77
C.elegans F25H5.5 172742   NP_492456 28
D.melanogaster CG32251 326205   NP_728981 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)