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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RPUSD2, RNA pseudouridylate synthase domain containing 2
Sequence ID:NM_152260
Entrez Gene ID:27079
Ensembl ID:ENSG00000166133

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 40861536 - 40866661

NM_152260 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16064086153640862141
6079034086380240864098
90418394086572540866660

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4420027Full LengthBC016967RNA pseudouridylate synthase domain containing 2
3953315IncompleteBC007697RNA pseudouridylate synthase domain containing 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689473  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_152260 NP_689473 Q8IZ73 PseudoU_synth_2

Related Sequences

 
mRNAGenPeptSwissProt
BC007697 AAH07697 Q8IZ73
BC016967 AAH16967 Q8IZ73
AK055971 BAB71059 Q8IZ73
AK293145 BAG56692 B4DDD1
AK301383 BAG62923 B4DW61
AK301706 BAG63178 B4DWW6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPUSD2 NP_689473 M.musculus Rpusd2 271842 Gene Info NP_775626 79
R.norvegicus Rpusd2 311326   NP_001129317 78
A.gambiae AgaP_AGAP009693 1279080   XP_553504 53
D.melanogaster RluA-1 34438   NP_723594 52
C.elegans K07E8.7 173456   NP_493778 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)