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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HESX1, HESX homeobox 1
Sequence ID:NM_003865
RefSeqGene ID:NG_008242
Entrez Gene ID:8820
Ensembl ID:ENSG00000163666

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p14.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 57232224 - 57234015

NM_003865 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
133895723194657232322
3904915723241857232519
4926915723278057232979
69211825723378957234279

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262115Full LengthBC069515HESX homeobox 1
7939824Full LengthBC093979HESX homeobox 1
8327557Full LengthBC112089HESX homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003856  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003865 NP_003856 Q9UBX0 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC069515 AAH69515 Q9UBX0
BC093979 AAH93979 Q9UBX0
BC112089 AAI12090 Q9UBX0
EU446670 ABZ92199  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HESX1 NP_003856 R.norvegicus Hesx1 498575   NP_001102576 82
M.musculus Hesx1 15209 Gene Info NP_034550 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)