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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. AHR, aryl hydrocarbon receptor
Sequence ID:NM_001621
Entrez Gene ID:196
Ensembl ID:ENSG00000106546

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7p15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 17384238 - 17385775

 Exon Info From UCSC:
NM_001621

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262381Full LengthBC069390aryl hydrocarbon receptor
30342582Full LengthBC070080aryl hydrocarbon receptor
4050637IncompleteBC021696aryl hydrocarbon receptor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001612  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001621 NP_001612 P35869 HLH
PAS
PAS_3

Related Sequences

 
mRNAGenPeptSwissProt
L19872 AAA16210 P35869
BC069390 AAH69390 P35869
BC070080 AAH70080 P35869
D16354 BAA03857 P35869

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AHR NP_001612 M.musculus Ahr 11622 Gene Info NP_038492 75
R.norvegicus Ahr 25690   NP_037281 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta