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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MEAF6, MYST/Esa1-associated factor 6
Sequence ID:NM_001270875
NM_001270876
NM_022756
NR_073090
NR_073091
NR_073092
Entrez Gene ID:64769
Ensembl ID:ENSG00000163875

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p35.3-p33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 37958914 - 37980355

Transcript StartTranscript EndChromosomal Start Chromosomal End
2015523795817537959707
155315863796148537961518
158716163796230737962336
161718093796740437967596
181018553797487837974923
185619433797505537975142
194420593797902337979138
206021663798025737980363

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4102633Full LengthBC016328chromosome 1 open reading frame 149
6471256Full LengthBC056406chromosome 1 open reading frame 149

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001270875 NP_001257804    
NM_001270876 NP_001257805    
NM_022756 NP_073593    

Related Sequences

 
mRNAGenPeptSwissProt
BC016328 AAH16328 Q9HAF1
BC056406 AAH56406 Q9HAF1
AY211926 AAO65179 Q9HAF1
DQ099384 AAZ13760 Q9HAF1
EU831681 ACE86515  
EU832600 ACE87002  
EU832519 ACE87691  
HQ448659 ADQ33137  
AK021792 BAB13898 Q9HAF1
BX538212 CAD98071 Q9HAF1
BX640719 CAE45838 Q9HAF1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MEAF6 NP_073593 M.musculus Meaf6 70088 Gene Info NP_081586 99
R.norvegicus Meaf6 362594   XP_342913 98
D.melanogaster Eaf6 38637   NP_647981 66
A.gambiae AgaP_AGAP006810 1270255   XP_308936 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)