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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SPATA17, spermatogenesis associated 17
Sequence ID:NM_138796
Entrez Gene ID:128153
Ensembl ID:ENSG00000162814

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q41Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 217804685 - 218040484

 Exon Info From UCSC:
NM_138796

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4824429Full LengthBC014608spermatogenesis associated 17

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_620151  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_138796 NP_620151 Q96L03 IQ

Related Sequences

 
mRNAGenPeptSwissProt
BC014608 AAH14608 Q96L03
AY963797 AAY33662 Q96L03
EU832204 ACE86774  
EU832110 ACE87460  
JF432537 ADZ15754  
AK098591 BAC05343 Q96L03

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SPATA17 NP_620151 M.musculus Spata17 74717 Gene Info NP_083124 76
R.norvegicus Spata17 498305   XP_573534 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)