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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IGSF3, Immunoglobulin superfamily, member 3
Sequence ID:NM_001542
NM_001007237
Entrez Gene ID:3321
Ensembl ID:ENSG00000143061

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 117117030 - 117209048

 Exon Info From UCSC:
NM_001542
NM_001007237

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6166346Full LengthBC110651immunoglobulin superfamily, member 3
9052652Full LengthBC144132immunoglobulin superfamily, member 3
40146310Full LengthBC130279immunoglobulin superfamily, member 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001007238  NP_001533  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001007237 NP_001007238 O75054 ig
I-set
V-set
NM_001542 NP_001533   ig
I-set
V-set

Related Sequences

 
mRNAGenPeptSwissProt
AF031174 AAC72013 O75054
BC110651 AAI10652  
BC130279 AAI30280  
BC144132 AAI44133  
EU832189 ACE86759  
EU832096 ACE87446  
AB007935 BAA32311 O75054
AK097809 BAC05175  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IGSF3 NP_001533 M.musculus Igsf3 78908 Gene Info NP_997088 93
R.norvegicus Igsf3 295325   NP_001099925 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)