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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GRTP1, growth hormone regulated TBC protein 1
Sequence ID:NM_024719
Entrez Gene ID:79774
Ensembl ID:ENSG00000139835

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 113979861 - 114018366

NM_024719 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19405113978505113978891
406591113979975113980160
592764113980233113980405
765861113999177113999273
862986114005163114005287
9871145114009637114009795
11461294114018076114018224
12951423114018334114018462

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8327591Full LengthBC112123growth hormone regulated TBC protein 1
8327593Full LengthBC112125growth hormone regulated TBC protein 1
3641318IncompleteBC033071growth hormone regulated TBC protein 1
6175472IncompleteBC062461growth hormone regulated TBC protein 1
6644085IncompleteBC080640growth hormone regulated TBC protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_078995  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024719 NP_078995 Q5TC63 TBC

Related Sequences

 
mRNAGenPeptSwissProt
BC033071 AAH33071 Q5TC63
BC062461 AAH62461 Q5TC63
BC080640 AAH80640 Q5TC63
BC112123 AAI12124 Q5TC63
BC112125 AAI12126 Q5TC63
AK026127 BAB15368 Q5TC63
AK300897 BAG62536 B4DV24
AB449887 BAH16630 B9A6K2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GRTP1 NP_078995 R.norvegicus Grtp1 361180   NP_001163948 87
M.musculus Grtp1 66790 Gene Info NP_080044 85
A.gambiae AgaP_AGAP003798 1271537   XP_310355 45
D.melanogaster CG5916 41960   NP_650524 45
S.cerevisiae MSB3 855423   NP_014106 41
P.falciparum PF11_0151 810698   XP_001347822 40
C.elegans tbc-6 182185   NP_001021909 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)