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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PLN, phospholamban
Sequence ID:NM_002667
RefSeqGene ID:NG_009082
Entrez Gene ID:5350
Ensembl ID:ENSG00000198523

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
CARDIOMYOPATHY, DILATED, 1P 
CARDIOMYOPATHY, FAMILIALHYPERTROPHIC, 18 

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 118869490 - 118880243

NM_002667 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1114118869441118869554
1151713118879987118881585

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3934199Full LengthBC005269phospholamban

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002658  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002667 NP_002658 Q5R352
P26678
Phospholamban

Related Sequences

 
mRNAGenPeptSwissProt
M63603 AAA60083 Q5R352
P26678
M60411 AAA60109 Q5R352
P26678
BC005269 AAH05269 Q5R352
P26678
DQ893034 ABM83960  
DQ896146 ABM87145  
AK311799 BAG34742 Q5R352

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PLN NP_002658 M.musculus Pln 18821 Gene Info NP_001135399 98
R.norvegicus Pln 64672   NP_073198 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)