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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. UBA5, ubiquitin-like modifier activating enzyme 5
Sequence ID:NM_024818
NM_198329
Entrez Gene ID:79876
Ensembl ID:ENSG00000081307

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 132379381 - 132395370

 Exon Info From UCSC:
NM_024818
NM_198329

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3879061Full LengthBC009737ubiquitin-like modifier activating enzyme 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_938143  NP_079094  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024818 NP_079094 Q9GZZ9 ThiF
NM_032169 NP_115545   Acyl-CoA_dh_1
APH
Acyl-CoA_dh_M
Acyl-CoA_dh_2
NM_198329 NP_938143   ThiF

Related Sequences

 
mRNAGenPeptSwissProt
BC009737 AAH09737 Q9GZZ9
BC019607 AAH19607 Q709F0
BC125204 AAI25205 Q709F0
BC125205 AAI25206 Q08AE9
AY253672 AAP79600 Q9GZZ9
AK022654 BAB14158 Q709F0
AK026904 BAB15587 Q9GZZ9
AK027563 BAB55199 Q9GZZ9
AB154406 BAD15375 Q9GZZ9
AK131265 BAD18443 Q709F0
AK298627 BAG60803 B4DQ41
AL136757 CAB66691 Q9GZZ9
AJ608287 CAE55233 Q709F0
AX803783 CAE75545  
AX803785 CAE75546  
AL833721 CAH56228 Q709F0
AL832873 CAH56354 Q709F0
AM392525 CAL37403  
AM393124 CAL38002  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens UBA5 NP_079094 R.norvegicus Uba5 300968   NP_001009669 89
M.musculus Uba5 66663 Gene Info NP_079968 88
A.gambiae AgaP_AGAP009012 1279970   XP_319759 68
C.elegans T03F1.1 171968   NP_491248 66
D.melanogaster CG1749 32094   NP_572722 66
A.thaliana AT1G05350 837034   NP_172027 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)