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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TSPAN8, tetraspanin 8
Sequence ID:NM_004616
Entrez Gene ID:7103
Ensembl ID:ENSG00000127324

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q14.1-q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 71518876 - 71551565

NM_004616 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
303207151887671519166
3214047152311071523193
4055367152647271526603
5376447153173271531839
6457197153193571532009
7208577153349071533627
8589207153793071537992
92110897155139871551566
109011597155170971551778

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3934330Full LengthBC005246tetraspanin 8
4289024IncompleteBC070168tetraspanin 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004607  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004616 NP_004607 P19075 Tetraspannin

Related Sequences

 
mRNAGenPeptSwissProt
M35252 AAA35709 P19075
BC005246 AAH05246 P19075
JF432460 ADZ15677  
AK223022 BAD96742 Q53GA9
AK313112 BAG35934 P19075

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TSPAN8 NP_004607 M.musculus Tspan8 216350 Gene Info NP_001162150 71
R.norvegicus Tspan8 171048   NP_598210 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)