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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MCF2L, MCF.2 cell line derived transforming sequence-like
Sequence ID:NM_001112732
NM_024979
Entrez Gene ID:23263
Ensembl ID:ENSG00000126217

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 113633946 - 113750801

 Exon Info From UCSC:
NM_001112732
NM_024979

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4121441Full LengthBC020208MCF.2 cell line derived transforming sequence-like
4138009Full LengthBC011853MCF.2 cell line derived transforming sequence-like
40007824IncompleteBC107066MCF.2 cell line derived transforming sequence-like
40007827IncompleteBC107067MCF.2 cell line derived transforming sequence-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079255  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001112732 NP_001106203    
NM_024979 NP_079255   PH
Spectrin
RhoGEF

Related Sequences

 
mRNAGenPeptSwissProt
BC011853 AAH11853 O15068
BC020208 AAH20208 O15068
BC107066 AAI07067 Q3B839
BC107067 AAI07068 Q3B838
DQ892041 ABM82967  
DQ895233 ABM86159  
AB002360 BAA20817 O15068
AK057899 BAB71611 Q96LQ9
AB116074 BAD08351 O15068
AB116075 BAD08352 O15068
AK094768 BAG52925 B3KT13
AK295047 BAG58097 B4DHD6
AK295670 BAG58528 O15068
AK315969 BAH14340 B7Z9K4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MCF2L NP_001106203 M.musculus Mcf2l 17207 Gene Info NP_835177 89
R.norvegicus Mcf2l 117020   NP_446403 88
A.gambiae AgaP_AGAP007723 4576783   XP_564500 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)