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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GPR88, G protein-coupled receptor 88
Sequence ID:NM_022049
Entrez Gene ID:54112
Ensembl ID:ENSG00000181656

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 101003692 - 101007571

NM_022049 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1331101003727101004057
3323464101004449101007581

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5729354IncompleteBC036775G protein-coupled receptor 88
100068942BC172248G protein-coupled receptor 88

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_071332  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022049 NP_071332 Q9GZN0 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC036775 AAH36775 Q9GZN0
BC172248 AAI72248 Q9GZN0
AB042410 BAB18247 Q9GZN0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GPR88 NP_071332 M.musculus Gpr88 64378 Gene Info NP_071872 96
R.norvegicus Gpr88 64443   NP_113884 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)