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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TIGD6, Tigger transposable element derived 6
Sequence ID:NM_030953
NM_001243253
Entrez Gene ID:81789
Ensembl ID:ENSG00000164296

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 149373592 - 149380217

Transcript StartTranscript EndChromosomal Start Chromosomal End
203327149372684149375991
33283508149380036149380216

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40125800Full LengthBC117249tigger transposable element derived 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112215  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001243253 NP_001230182    
NM_030953 NP_112215 Q17RP2 DDE
CENP-B_N

Related Sequences

 
mRNAGenPeptSwissProt
BC117249 AAI17250 Q17RP2
AK056604 BAB71230 Q17RP2
AK096325 BAG53260 Q17RP2
AL136539 CAB66474 Q17RP2
CR533559 CAG38590 Q17RP2
AM393758 CAL38633  
XM_001127077 XP_001127077  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TIGD6 NP_112215 A.gambiae AgaP_AGAP001906 1281221   XP_321159 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)