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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NCAN, neurocan
Sequence ID:NM_004386
Entrez Gene ID:1463
Ensembl ID:ENSG00000130287

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 19322837 - 19363040

 Exon Info From UCSC:
NM_004386

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40080846BC111851neurocan

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004377  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004386 NP_004377 O14594 EGF
Lectin_C
Sushi
Xlink

Related Sequences

 
mRNAGenPeptSwissProt
AF026547 AAC80576 O14594
BC111851 AAI11852 O14594
AB210004 BAE06086 Q4LE67
AK297395 BAG59835 B4DMC3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NCAN NP_004377 R.norvegicus Ncan 58982   NP_113841 71
M.musculus Ncan 13004 Gene Info NP_031815 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)