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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TLX2, T-cell leukemia homeobox 2
Sequence ID:NM_016170
Entrez Gene ID:3196
Ensembl ID:ENSG00000115297

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 74741933 - 74743361

NM_016170 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17387474159574742332
7399767474275974742996
97721527474309974744274

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4125397Full LengthBC006356T-cell leukemia homeobox 2
4135413IncompleteBC006396T-cell leukemia homeobox 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057254  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016170 NP_057254 O43763 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC006356 AAH06356 O43763
EU446479 ABZ92008  
AB008501 BAA83463 O43763

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TLX2 NP_057254 M.musculus Tlx2 21909 Gene Info NP_033418 93
R.norvegicus Tlx2 680117   XP_001054603 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)