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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TRPC4AP, Transient receptor potential cation channel, subfamily C, member 4 associated protein
Sequence ID:NM_015638
NM_199368
Entrez Gene ID:26133
Ensembl ID:ENSG00000100991

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20q11.22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 33590212 - 33603875

 Exon Info From UCSC:
NM_015638
NM_199368

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4475866Full LengthBC013144transient receptor potential cation channel, subfamily C, member 4 associated protein
3456260IncompleteBC001323transient receptor potential cation channel, subfamily C, member 4 associated protein
3530893IncompleteBC008836transient receptor potential cation channel, subfamily C, member 4 associated protein

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015638 NP_056453 Q8TEL6  
NM_199368 NP_955400    

Related Sequences

 
mRNAGenPeptSwissProt
BC001323 AAH01323 Q8TEL6
BC008836 AAH08836 Q8TEL6
BC013144 AAH13144 Q8TEL6
JF432334 ADZ15551  
AK074106 BAB84932 Q8TEL6
AK315582 BAG37955 B2RDK8
AK298958 BAG61054 B4DQU2
AK301368 BAG62910 B4DW48
AK303476 BAG64513 B4E0Q1
AL117480 CAB55953 Q8TEL6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TRPC4AP NP_056453 M.musculus Trpc4ap 56407 Gene Info NP_001156924 98
R.norvegicus Trpc4ap 362247   NP_001094218 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)