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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GKN2, Gastrokine 2
Sequence ID:NM_182536
Entrez Gene ID:200504
Ensembl ID:ENSG00000183607

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 69172363 - 69180102

NM_182536 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
282456917236469172581
2464026917343569173591
4035136917427869174388
5146516917725769177394
6527056917783369177886
7068266917998169180101

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015065Full LengthBC146484gastrokine 2
100014309BC140335gastrokine 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_872342  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_182536 NP_872342 Q86XP6 BRICHOS

Related Sequences

 
mRNAGenPeptSwissProt
BC140335 AAI40336  
BC146484 AAI46485  
AF494509 AAO85515 Q86XP6
AY358664 AAQ89027 Q86XP6
AY943908 AAY24521 Q86XP6
AJ966788 CAI85014 Q86XP6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GKN2 NP_872342 R.norvegicus Gkn2 297419   NP_001034775 73
M.musculus Gkn2 66284 Gene Info NP_079743 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)