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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IRF7, interferon regulatory factor 7
Sequence ID:NM_001572
NM_004029
NM_004031
NM_004030
RefSeqGene ID:NG_029106
Entrez Gene ID:3665
Ensembl ID:ENSG00000185507

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15.5Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 612590 - 615650

 Exon Info From UCSC:
NM_001572
NM_004029
NM_004031

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020545Full LengthBC136555interferon regulatory factor 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004020  NP_004022  NP_001563  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001572 NP_001563 Q92985 IRF
NM_004029 NP_004020   IRF
NM_004031 NP_004022   IRF

Related Sequences

 
mRNAGenPeptSwissProt
U73036 AAB17190 Q92985
U53830 AAB80686 Q92985
U53831 AAB80688 Q92985
U53832 AAB80690 Q92985
U53832 AAB80691 Q92985
AF076494 AAC70999 Q92985
BC136555 AAI36556 Q92985
AK303752 BAG64723 B4E1B1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IRF7 NP_001563 M.musculus Irf7 54123 Gene Info NP_058546 70
R.norvegicus Irf7 293624   NP_001028863 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta