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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TSPAN12, tetraspanin 12
Sequence ID:NM_012338
RefSeqGene ID:NG_023203
Entrez Gene ID:23554
Ensembl ID:ENSG00000106025

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q31.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 120427373 - 120496882

NM_012338 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
181593120427375120428950
15941737120446602120446745
17381845120450516120450623
18461920120455782120455856
19212056120478830120478965
20572139120480080120480162
21402275120496751120496886
22762579120497873120498176

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5275953Full LengthBC031265tetraspanin 12

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036470  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012338 NP_036470 O95859 Tetraspannin

Related Sequences

 
mRNAGenPeptSwissProt
AF124522 AAD17317 O95859
BC031265 AAH31265 O95859
AY358703 AAQ89066 O95859
DQ893699 ABM84625  
AK312239 BAG35172 O95859
AK299247 BAG61278 O95859

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TSPAN12 NP_036470 M.musculus Tspan12 269831 Gene Info NP_766595 98
R.norvegicus Tspan12 362326   NP_001015026 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)