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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PYCRL, pyrroline-5-carboxylate reductase-like
Sequence ID:NM_023078
Entrez Gene ID:65263
Ensembl ID:ENSG00000104524

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 144686407 - 144687110

NM_023078 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11970144686082144688051
19712063144688231144688323
20642276144688636144688848
22772456144689122144689301
24572521144690231144690295
25222678144691627144691783

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3533609Full LengthBC007993pyrroline-5-carboxylate reductase-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075566  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_023078 NP_075566   F420_oxidored

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC007993 AAH07993 Q53H96 EC 1.5.1.2
HQ447399 ADQ31885    
AK023914 BAB14721 Q53H96 EC 1.5.1.2
AK222685 BAD96405 Q53H96 EC 1.5.1.2
AK001500 BAG50927 Q53H96 EC 1.5.1.2
AK294615 BAG57798 B4DGI7  
AK295444 BAG58383 B4DI71  
AK301225 BAG62798 B4DVT6  
AL833857 CAD38716 Q53H96 EC 1.5.1.2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PYCRL NP_075566 R.norvegicus Pycrl 300035   NP_001011993 83
M.musculus Pycrl 66194 Gene Info NP_079688 82
C.elegans M153.1 181380   NP_510032 46
D.melanogaster CG5840 42106   NP_650632 45
A.gambiae AgaP_AGAP005009 1275834   XP_315115 44
A.thaliana P5CR 831332   NP_196984 40
S.pombe SPAPYUG7.05 2543212   NP_594706 39
N.crassa NCU06471 3873483   XP_957362 38
S.cerevisiae PRO3 856744   NP_010940 35
P.falciparum MAL13P1.284 813846   XP_001350290 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)