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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PEX1, peroxisomal biogenesis factor 1
Sequence ID:NM_000466
RefSeqGene ID:NG_008341
Entrez Gene ID:5189
Ensembl ID:ENSG00000127980

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
PEROXISOME BIOGENESIS DISORDER 1A (ZELLWEGER)PEX10
PEX12
PEX13
PEX14
PEX19
PEX2
PEX26
PEX26
PEX3
PEX3
PEX5
PEX6
PEROXISOME BIOGENESIS DISORDER 1B (NALD/IRD) 
PEROXISOME BIOGENESIS DISORDER 2BPEX10
PEX13
PEX26
PEX26
PEX5

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 92116339 - 92157776

 Exon Info From UCSC:
NM_000466

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5498274Full LengthBC035575peroxisomal biogenesis factor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000457  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000466 NP_000457 O43933 AAA

Related Sequences

 
mRNAGenPeptSwissProt
AF026086 AAB87880 O43933
AF030356 AAB99758 O43933
BC035575 AAH35575 O43933
DQ890921 ABM81847  
AB008112 BAA85162 O43933
AB052090 BAB59061 O43933
AB052091 BAB59062 O43933
AB052092 BAB59063 O43933
AB052093 BAB59064 Q96S70
AB052094 BAB59065 Q96S69
AB209355 BAD92592 Q59FV4
AK292955 BAF85644 O43933
AK293757 BAG57177 B4DER6
AK293848 BAG57246 B4DEY5
AK295686 BAG58539 B4DIM7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PEX1 NP_000457 M.musculus Pex1 71382 Gene Info NP_082053 82
R.norvegicus Pex1 500006   NP_001102690 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)