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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PKP2, plakophilin 2
Sequence ID:NM_001005242
NM_004572
RefSeqGene ID:NG_009000
Entrez Gene ID:5318
Ensembl ID:ENSG00000057294

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
ARRHYTHMOGENIC RIGHT VENTRICULAR DYSPLASIA 9 

Cytogenetic Location (from UniGene)

Cytogenetic Location:12p11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 32945196 - 33003867

 Exon Info From UCSC:
NM_001005242
NM_004572

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8991915Full LengthBC126199plakophilin 2
9052484Full LengthBC143966plakophilin 2
30344248Full LengthBC094762plakophilin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004563  NP_001005242  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001005242 NP_001005242   Arm
NM_004572 NP_004563 Q99959 Arm

Related Sequences

 
mRNAGenPeptSwissProt
BC094762 AAH94762 Q99959
BC126199 AAI26200 Q99959
BC143966 AAI43967 Q99959
EU520483 ACD13292 B8QGS6
EU520484 ACD13293 B8QGS7
EU520485 ACD13294 B8QGS8
EU520486 ACD13295 B8QGS9
HQ258660 ADR83411  
AK299139 BAG61191 B4DR79
X97675 CAA66264 Q99959
X97675 CAA66265 Q99959

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PKP2 NP_001005242 R.norvegicus Pkp2 287925   NP_001093969 84
M.musculus Pkp2 67451 Gene Info NP_080439 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)