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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. THBS1, thrombospondin 1
Sequence ID:NM_003246
Entrez Gene ID:7057
Ensembl ID:ENSG00000137801

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 39873293 - 39887796

 Exon Info From UCSC:
NM_003246

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020458Full LengthBC136469thrombospondin 1
9020459Full LengthBC136470thrombospondin 1
5217975IncompleteBC028145thrombospondin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003237  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003246 NP_003237 P07996 EGF
TSP_1
VWC
TSP_3
TSP_C
EGF_CA

Related Sequences

 
mRNAGenPeptSwissProt
M25631 AAA36741 P07996
M14326 AAA61237 P07996
M99425 AAB59366 P07996
BC028145 AAH28145 A0PJG0
BC136469 AAI36470 P07996
BC136470 AAI36471 P07996
AB209912 BAD93149 Q59E99
AK291639 BAF84328 P07996
AK293230 BAG56769 B4DDK8
AK304754 BAG65509 B4E3J7
X04665 CAA28370 P07996
X14787 CAA32889 P07996

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens THBS1 NP_003237 M.musculus Thbs1 21825 Gene Info NP_035710 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta