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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CXCL6, chemokine (C-X-C motif) ligand 6
Sequence ID:NM_002993
Entrez Gene ID:6372
Ensembl ID:ENSG00000124875

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 74702395 - 74703358

NM_002993 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13047470227274702575
3054377470268074702812
4385217470291974703002
52216587470333974704475

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4471095Full LengthBC013744chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002984  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002993 NP_002984 P80162 IL8

Related Sequences

 
mRNAGenPeptSwissProt
U81234 AAD00506 P80162
BC013744 AAH13744 P80162
DQ891500 ABM82426  
DQ894692 ABM85618  
AK311981 BAG34920 P80162
Y08770 CAA70023 P80162

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CXCL6 NP_002984 M.musculus Cxcl5 20311 Gene Info NP_033167 62
R.norvegicus Cxcl5 60665   NP_071550 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)