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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. UBE2J1, ubiquitin-conjugating enzyme E2, J1
Sequence ID:NM_016021
Entrez Gene ID:51465
Ensembl ID:ENSG00000198833

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 90036343 - 90038377

NM_016021 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2033519003634490039675
335234719004280490042923
347236019004502090045149
360237079004792390048028
370837929004817790048261
379339249005204290052173
392539989005340190053474
399943609006225790062618

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4137664Full LengthBC013973ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057105  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_016021 NP_057105 Q9Y385 EC 6.3.2.19 UQ_con

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF151834 AAD34071 Q9Y385 EC 6.3.2.19
U93243 AAF21505 Q9Y385 EC 6.3.2.19
AF161502 AAF29117 Q9Y385 EC 6.3.2.19
AF151039 AAF36125 Q9Y385 EC 6.3.2.19
BC013973 AAH13973 Q9Y385 EC 6.3.2.19
DQ895144 ABM86070    
EU176317 ABW03768    
AK223464 BAD97184 Q9Y385 EC 6.3.2.19
AK290574 BAF83263 Q9Y385 EC 6.3.2.19
AK300629 BAG62320 B4DUF8  
AJ245898 CAB83212 Q9Y385 EC 6.3.2.19

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens UBE2J1 NP_057105 M.musculus Ube2j1 56228 Gene Info NP_062532 92
A.thaliana UBC32 820956   NP_566563 61
C.elegans ubc-6 174217   NP_001040755 48
N.crassa NCU01268 3876896   XP_960746 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)