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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EQTN, equatorin, sperm acrosome associated
Sequence ID:NM_001161585
NM_020641
Entrez Gene ID:54586
Ensembl ID:ENSG00000120160

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 27284666 - 27297137

 Exon Info From UCSC:
NM_001161585
NM_020641

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9021349Full LengthBC137351chromosome 9 open reading frame 11
9021350Full LengthBC137352chromosome 9 open reading frame 11
9053133Full LengthBC144602chromosome 9 open reading frame 11

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001161585 NP_001155057    
NM_020641 NP_065692 Q9NQ60  

Related Sequences

 
mRNAGenPeptSwissProt
BC014307 AAH14307 Q9NQ60
BC137351 AAI37352 Q9NQ60
BC137352 AAI37353 Q9NQ60
BC144602 AAI44603 Q9NQ60
AJ278482 CAC00687 Q9NQ60

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C9orf11 NP_065692 R.norvegicus Afaf 500502   NP_001034434 60
M.musculus 4930579C15Rik 67753 Gene Info NP_081365 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)