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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SLC30A4, solute carrier family 30 (zinc transporter), member 4
Sequence ID:NM_013309
Entrez Gene ID:7782
Ensembl ID:ENSG00000104154

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q21.1|15q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 45777102 - 45814552

NM_013309 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1028434577468145777514
284429784577880845778942
297930844577972445779829
308532864578103845781239
328734404578292545783078
344135874580333545803481
358840924581416145814665
409342904581480445815001

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4829839Full LengthBC026089solute carrier family 30 (zinc transporter), member 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_037441  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013309 NP_037441 O14863 Cation_efflux

Related Sequences

 
mRNAGenPeptSwissProt
AF025409 AAB82561 O14863
BC026089 AAH26089 O14863
AY029482 AAK40257 Q96JT7
DQ892121 ABM83047  
EU176547 ABW03348  
AK290874 BAF83563 O14863

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC30A4 NP_037441 M.musculus Slc30a4 22785 Gene Info NP_035904 93
R.norvegicus Slc30a4 64469   NP_742063 91
A.thaliana MTPB1 817490   NP_180502 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)