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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. AMICA1, Adhesion molecule, interacts with CXADR antigen 1
Sequence ID:NM_153206
NM_001098526
Entrez Gene ID:120425
Ensembl ID:ENSG00000160593

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 118064680 - 118095729

 Exon Info From UCSC:
NM_153206
NM_001098526

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40000649Full LengthBC100794adhesion molecule, interacts with CXADR antigen 1
40000652Full LengthBC100795adhesion molecule, interacts with CXADR antigen 1
40000654Full LengthBC100796adhesion molecule, interacts with CXADR antigen 1
40000656Full LengthBC100797adhesion molecule, interacts with CXADR antigen 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_694938  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001098526 NP_001091996 Q86YT9  
NM_153206 NP_694938   V-set

Related Sequences

 
mRNAGenPeptSwissProt
BC100794 AAI00795 Q496M4
BC100795 AAI00796 Q496M3
BC100796 AAI00797 Q496M2
BC100797 AAI00798 Q496M1
AY093686 AAM15730 Q86YT9
AY093687 AAM15731 Q5DTC5
AY138965 AAN52117 Q86YT9
AY358362 AAQ88728 Q86YT9
AK090409 BAC03390 Q86YT9
AK094399 BAC04347 Q86YT9
AK097285 BAG53445 B3KUI3
AK298722 BAG60876 Q496M4
AK300851 BAG62502 B4DUZ0
AK301099 BAG62698 B4DVI6
AJ515553 CAD56620 Q86YT9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AMICA1 NP_001091996 R.norvegicus Amica1 315610   XP_236198 64
M.musculus Amica1 270152 Gene Info NP_001005421 61

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)