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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LRP1, low density lipoprotein receptor-related protein 1
Sequence ID:NM_002332
RefSeqGene ID:NG_016444
Entrez Gene ID:4035
Ensembl ID:ENSG00000123384

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13-q14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 57532308 - 57607123

 Exon Info From UCSC:
NM_002332

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002323  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002332 NP_002323 Q07954 EGF
Ldl_recept_a
Ldl_recept_b
EGF_CA

Related Sequences

 
mRNAGenPeptSwissProt
BC021204 AAH21204 Q6PJ72
BC045107 AAH45107 Q86SW0
BC052593 AAH52593 Q7Z7K9
BC072015 AAH72015 Q7Z7K9
AF370375 AAQ15211 Q71RG2
AB209498 BAD92735 Q59FG2
X13916 CAA32112 Q07954
X55077 CAA38905 Q6LBN5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LRP1 NP_002323 M.musculus Lrp1 16971 Gene Info NP_032538 98
R.norvegicus Lrp1 299858   XP_243524 98
A.gambiae AgaP_AGAP012372 1280340   XP_320185 41
D.melanogaster LRP1 35799   NP_788284 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)