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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLDN8, claudin 8
Sequence ID:NM_199328
NM_012132
Entrez Gene ID:9073
Ensembl ID:ENSG00000156284

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 31586498 - 31588391

Transcript StartTranscript EndChromosomal Start Chromosomal End
321473158632431588468

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4594155Full LengthBC020866claudin 8
4606880Full LengthBC058004claudin 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_955360  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_199328 NP_955360 P56748 PMP22_Claudin

Related Sequences

 
mRNAGenPeptSwissProt
BC020866 AAH20866 P56748
BC058004 AAH58004 P56748
AY358707 AAQ89070 P56748
DQ892002 ABM82928  
DQ895192 ABM86118  
AK223512 BAD97232 P56748
AK022269 BAG51070 B3KMQ8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLDN8 NP_955360 M.musculus Cldn8 54420 Gene Info NP_061248 83
R.norvegicus Cldn8 304124   NP_001032863 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)