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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TAT, tyrosine aminotransferase
Sequence ID:NM_000353
RefSeqGene ID:NG_008235
Entrez Gene ID:6898
Ensembl ID:ENSG00000198650

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
TYROSINEMIA, TYPE II 

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 71602046 - 71610998

 Exon Info From UCSC:
NM_000353

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40146565Full LengthBC130534tyrosine aminotransferase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000344  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000353 NP_000344 P17735 EC 2.6.1.5 Aminotran_1_2
TAT_ubiq

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC020707 AAH20707 Q8WW92  
BC130534 AAI30535 A1L4G7  
HQ258233 ADR82987    
AK313380 BAG36178 P17735 EC 2.6.1.5
X52520 CAA36750 P17735 EC 2.6.1.5
X55675 CAA39210 P17735 EC 2.6.1.5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TAT NP_000344 M.musculus Tat 234724 Gene Info NP_666326 92
R.norvegicus Tat 24813   NP_036800 92
A.gambiae AgaP_AGAP000327 1271932   XP_310789 57
D.melanogaster CG1461 32381   NP_572953 53
C.elegans F42D1.2 181574   NP_510454 44
A.thaliana AT5G36160 833613   NP_198465 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)