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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. VIPAS39, VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
Sequence ID:NM_001193314
NM_001193315
NM_001193316
NM_001193317
NM_022067
RefSeqGene ID:NG_023421
Entrez Gene ID:63894
Ensembl ID:ENSG00000151445

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14q24.3-q31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 77893022 - 77923929

 Exon Info From UCSC:
NM_001193314
NM_001193315
NM_001193316
NM_001193317
NM_022067

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3920459Full LengthBC015054chromosome 14 open reading frame 133

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001193314 NP_001180243    
NM_001193315 NP_001180244    
NM_001193316 NP_001180245    
NM_001193317 NP_001180246    
NM_022067 NP_071350 Q9H9C1
Q6IA61
 

Related Sequences

 
mRNAGenPeptSwissProt
BC015054 AAH15054 Q9H9C1
Q6IA61
AK022769 BAB14237 Q9H9C1
AK022925 BAB14310 Q9H9C1
Q6IA61
AK024661 BAB14951 Q9H9C1
AK222706 BAD96426 Q53H75
AK098254 BAG53601 Q6IA61
AK297388 BAG59829 B4DMB7
AK298354 BAG60598 Q9H9C1
CR457294 CAG33575 Q9H9C1
Q6IA61

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C14orf133 NP_001180243 M.musculus Vipar 104799 Gene Info NP_598805 96
A.gambiae AgaP_AGAP001233 1281938   XP_321923 32
D.melanogaster Vps16B 43521   NP_651731 30
C.elegans spe-39 179071   NP_504718 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)