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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARID4A, AT rich interactive domain 4A (RBP1-like)
Sequence ID:NM_002892
NM_023000
NM_023001
Entrez Gene ID:5926
Ensembl ID:ENSG00000032219

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14q23.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 58813148 - 58814444

 Exon Info From UCSC:
NM_002892
NM_023000
NM_023001

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069057Full LengthBC172363AT rich interactive domain 4A (RBP1-like)
4701217IncompleteBC026230AT rich interactive domain 4A (RBP1-like)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075376  NP_002883  NP_075377  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002892 NP_002883 P29374 ARID
RBB1NT
NM_023000 NP_075376   ARID
RBB1NT
NM_023001 NP_075377   ARID
RBB1NT

Related Sequences

 
mRNAGenPeptSwissProt
S57153 AAB25833 P29374
S57160 AAB25834 P29374
S57162 AAB25835 P29374
S66427 AAB28543 P29374
BC026230 AAH26230 Q05CG0
BC172363 AAI72363  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARID4A NP_075377 M.musculus Arid4a 238247 Gene Info NP_001074664 82
R.norvegicus Arid4a 314205   NP_001101499 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)