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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. THRAP3, Thyroid hormone receptor associated protein 3
Sequence ID:NM_005119
Entrez Gene ID:9967
Ensembl ID:ENSG00000054118

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p34.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 36690045 - 36770157

 Exon Info From UCSC:
NM_005119

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40012311Full LengthBC112330thyroid hormone receptor associated protein 3
40012315Full LengthBC112350thyroid hormone receptor associated protein 3
3050423IncompleteBC002501thyroid hormone receptor associated protein 3
3834482IncompleteBC019076thyroid hormone receptor associated protein 3
3956862IncompleteBC010997thyroid hormone receptor associated protein 3
4939866IncompleteBC037554thyroid hormone receptor associated protein 3
5787102IncompleteBC065519thyroid hormone receptor associated protein 3
6147798IncompleteBC054046thyroid hormone receptor associated protein 3

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005119 NP_005110 Q9Y2W1  

Related Sequences

 
mRNAGenPeptSwissProt
AF117756 AAD22034 Q9Y2W1
BC002501 AAH02501 Q6PJV4
BC010997 AAH10997 Q6PJV4
BC019076 AAH19076 Q05D20
BC037554 AAH37554 Q9Y2W1
BC054046 AAH54046 Q7Z5U1
BC065519 AAH65519 Q6P0P7
BC112330 AAI12331 Q9Y2W1
BC112350 AAI12351 Q9Y2W1
EU446755 ABZ92284  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens THRAP3 NP_005110 R.norvegicus Thrap3 313591   NP_001009693 94
M.musculus Thrap3 230753 Gene Info NP_666265 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)