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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CCT5, chaperonin containing TCP1, subunit 5 (epsilon)
Sequence ID:NM_012073
RefSeqGene ID:NG_012160
Entrez Gene ID:22948
Ensembl ID:ENSG00000150753

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5p15.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 10261002 - 10265125

 Exon Info From UCSC:
NM_012073

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2824199Full LengthBC006543chaperonin containing TCP1, subunit 5 (epsilon)
4329194Full LengthBC035499chaperonin containing TCP1, subunit 5 (epsilon)
3534054IncompleteBC009454chaperonin containing TCP1, subunit 5 (epsilon)
3543711IncompleteBC002971chaperonin containing TCP1, subunit 5 (epsilon)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036205  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012073 NP_036205 P48643 Cpn60_TCP1

Related Sequences

 
mRNAGenPeptSwissProt
AF275798 AAG23814 Q9HB74
BC002971 AAH02971 Q9BU08
BC006543 AAH06543 P48643
BC009454 AAH09454 Q96GI1
BC035499 AAH35499 P48643
DQ892743 ABM83669  
DQ895989 ABM86942  
D43950 BAA07894 P48643
AK289353 BAF82042 P48643
AK290393 BAF83082 A8K2X8
AK293341 BAG56857 B4DDU6
AK293437 BAG56941 B4DE30
AK301760 BAG63220 B4DX08
AK301985 BAG63393 B4DXI1
AK302368 BAG63690 B4DYC8
AK302383 BAG63700 B4DYD8
AK303086 BAG64197 B4DZT5
AK303147 BAG64251 B4DZY9
AK316376 BAH14747 B7ZAR1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCT5 NP_036205 M.musculus Cct5 12465 Gene Info NP_031663 96
R.norvegicus Cct5 294864   NP_001004078 96
D.melanogaster Cct5 36308   NP_523707 71
A.gambiae AgaP_AGAP008249 1277732   XP_317219 70
S.pombe cct5 2542868   NP_593277 70
N.crassa NCU03980 3872712   XP_956565 70
C.elegans cct-5 175588   NP_741117 69
A.thaliana AT1G24510 839066   NP_173859 69
S.cerevisiae CCT5 853527   NP_012598 61
P.falciparum PFC0900w 814517   XP_001351273 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)