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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SPO11, SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)
Sequence ID:NM_012444
NM_198265
Entrez Gene ID:23626
Ensembl ID:ENSG00000054796

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20q13.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 55904890 - 55919050

 Exon Info From UCSC:
NM_012444
NM_198265

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5167214Full LengthBC033591SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_937998  NP_036576  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012444 NP_036576 Q9Y5K1 SPO11_like
TP6A_N
NM_198265 NP_937998   SPO11_like
TP6A_N

Related Sequences

 
mRNAGenPeptSwissProt
AF149310 AAD44812 Q9Y5K1
AF169385 AAD52562 Q9Y5K1
BC033591 AAH33591 Q9Y5K1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SPO11 NP_036576 R.norvegicus Spo11 366261   NP_001102434 84
M.musculus Spo11 26972 Gene Info NP_036176 83
A.gambiae AgaP_AGAP010898 1271049   XP_309793 38
A.thaliana RHL2 831314   NP_195902 38
D.melanogaster mei-W68 2768853   NP_995901 36
S.pombe rec12 2542150   NP_593479 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)