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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DEGS2, delta(4)-desaturase, sphingolipid 2
Sequence ID:NM_206918
Entrez Gene ID:123099
Ensembl ID:ENSG00000168350

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14q32.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 100613077 - 100625932

NM_206918 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
7498100612752100613243
4991241100615304100616046
12421411100625842100626011

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4775939Full LengthBC063598degenerative spermatocyte homolog 2, lipid desaturase (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_996801  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_206918 NP_996801 Q6QHC5 FA_desaturase
Lipid_DES

Related Sequences

 
mRNAGenPeptSwissProt
BC063598 AAH63598 Q6QHC5
AY541700 AAS68362 Q6QHC5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DEGS2 NP_996801 R.norvegicus Degs2 314438   NP_001017457 87
M.musculus Degs2 70059 Gene Info NP_081575 86
D.melanogaster ifc 33836   NP_476594 58
A.gambiae AgaP_AGAP011402 1278292   XP_317914 57
C.elegans Y54E5A.1 173327   NP_493549 54
N.crassa NCU08927 3876756   XP_960609 49
A.thaliana DES-1-LIKE 825832   NP_192402 47
S.pombe dsd1 2541019   NP_596407 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)